STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H0VFQ7_CAVPOProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (418 aa)    
Predicted Functional Partners:
CCNK
Cyclin K; Belongs to the cyclin family.
   
 0.989
SUPT5H
Transcription elongation factor SPT5.
    
 0.957
POLR2A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.956
CDK7
Cyclin dependent kinase 7.
   
0.943
H0VDT0_CAVPO
Protein kinase domain-containing protein.
    
 0.919
Cdk9
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.919
CCNT1
Cyclin T1; Belongs to the cyclin family.
   
 0.914
CCNT2
Cyclin T2; Belongs to the cyclin family.
   
 0.912
CCNH
Cyclin H; Belongs to the cyclin family.
    
 0.886
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.874
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.