Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCPOP00000031632 | ERCC1 | ENSCPOP00000031632 | ENSCPOP00000031152 | Ubiquitin-like domain-containing protein. | ERCC excision repair 1, endonuclease non-catalytic subunit. | 0.684 |
ENSCPOP00000031632 | H0W3J0_CAVPO | ENSCPOP00000031632 | ENSCPOP00000017537 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.998 |
ENSCPOP00000031632 | MYSM1 | ENSCPOP00000031632 | ENSCPOP00000005904 | Ubiquitin-like domain-containing protein. | Myb like, SWIRM and MPN domains 1. | 0.990 |
ENSCPOP00000031632 | UBB | ENSCPOP00000031632 | ENSCPOP00000029946 | Ubiquitin-like domain-containing protein. | Polyubiquitin-B; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair [...] | 0.919 |
ENSCPOP00000031632 | UBL4A | ENSCPOP00000031632 | ENSCPOP00000027861 | Ubiquitin-like domain-containing protein. | Ubiquitin like 4A. | 0.790 |
ENSCPOP00000031632 | UBL4B | ENSCPOP00000031632 | ENSCPOP00000032100 | Ubiquitin-like domain-containing protein. | Ubiquitin like 4B. | 0.769 |
ENSCPOP00000031632 | USP45 | ENSCPOP00000031632 | ENSCPOP00000009218 | Ubiquitin-like domain-containing protein. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.621 |
ENSCPOP00000031632 | Ubc | ENSCPOP00000031632 | ENSCPOP00000031925 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.914 |
ERCC1 | ENSCPOP00000031632 | ENSCPOP00000031152 | ENSCPOP00000031632 | ERCC excision repair 1, endonuclease non-catalytic subunit. | Ubiquitin-like domain-containing protein. | 0.684 |
ERCC1 | H0W3J0_CAVPO | ENSCPOP00000031152 | ENSCPOP00000017537 | ERCC excision repair 1, endonuclease non-catalytic subunit. | Uncharacterized protein. | 0.604 |
ERCC1 | H0WAD6_CAVPO | ENSCPOP00000031152 | ENSCPOP00000019948 | ERCC excision repair 1, endonuclease non-catalytic subunit. | Ubiquitin-like domain-containing protein. | 0.684 |
ERCC1 | Rps27a | ENSCPOP00000031152 | ENSCPOP00000005248 | ERCC excision repair 1, endonuclease non-catalytic subunit. | Ubiquitin-40S ribosomal protein S27a; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be i [...] | 0.684 |
ERCC1 | UBB | ENSCPOP00000031152 | ENSCPOP00000029946 | ERCC excision repair 1, endonuclease non-catalytic subunit. | Polyubiquitin-B; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair [...] | 0.696 |
ERCC1 | UBL4A | ENSCPOP00000031152 | ENSCPOP00000027861 | ERCC excision repair 1, endonuclease non-catalytic subunit. | Ubiquitin like 4A. | 0.593 |
ERCC1 | UBL4B | ENSCPOP00000031152 | ENSCPOP00000032100 | ERCC excision repair 1, endonuclease non-catalytic subunit. | Ubiquitin like 4B. | 0.593 |
ERCC1 | USP45 | ENSCPOP00000031152 | ENSCPOP00000009218 | ERCC excision repair 1, endonuclease non-catalytic subunit. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.676 |
ERCC1 | Ubc | ENSCPOP00000031152 | ENSCPOP00000031925 | ERCC excision repair 1, endonuclease non-catalytic subunit. | Uncharacterized protein. | 0.696 |
H0W3J0_CAVPO | ENSCPOP00000031632 | ENSCPOP00000017537 | ENSCPOP00000031632 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.998 |
H0W3J0_CAVPO | ERCC1 | ENSCPOP00000017537 | ENSCPOP00000031152 | Uncharacterized protein. | ERCC excision repair 1, endonuclease non-catalytic subunit. | 0.604 |
H0W3J0_CAVPO | H0WAD6_CAVPO | ENSCPOP00000017537 | ENSCPOP00000019948 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.998 |
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