STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAM10ADAM metallopeptidase domain 10. (679 aa)    
Predicted Functional Partners:
ADAM17
ADAM metallopeptidase domain 17.
     
0.943
TSPAN33
Tetraspanin.
    
 0.942
APP
Gamma-secretase C-terminal fragment 50; Functions as a cell surface receptor and performs physiological functions on the surface of neurons relevant to neurite growth, neuronal adhesion and axonogenesis. Interaction between APP molecules on neighboring cells promotes synaptogenesis. Involved in cell mobility and transcription regulation through protein-protein interactions (By similarity). Can promote transcription activation through binding to APBB1-KAT5 and inhibit Notch signaling through interaction with Numb (By similarity). Couples to apoptosis-inducing pathways such as those medi [...]
    
 0.823
EFNA2
Ephrin A2; Belongs to the ephrin family.
    
 0.822
HBEGF
Heparin binding EGF like growth factor.
     
 0.768
NOTCH1
Notch receptor 1.
    
 0.762
DLL1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
 0.760
NCSTN
Nicastrin.
    
 
 0.759
TSPAN14
Tetraspanin.
   
 0.757
NOTCH2
Notch receptor 2.
    
 0.732
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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