STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPM1Uncharacterized protein; Belongs to the tropomyosin family. (288 aa)    
Predicted Functional Partners:
TNNI3
Troponin I3, cardiac type.
   
 0.958
TNNT2
Uncharacterized protein.
   
 0.948
MYL1
Myosin light chain 1.
   
 0.945
TNNT3
Troponin T3, fast skeletal type.
   
 0.895
ACTC1
Actin alpha cardiac muscle 1.
   
 0.894
TNNI1
Troponin I1, slow skeletal type.
   
 0.887
TNNT1
Troponin T1, slow skeletal type.
   
 0.876
TNNI2
Troponin I2, fast skeletal type.
   
 0.862
MYH7
Myosin heavy chain 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.849
SMIM20
Small integral membrane protein 20.
   
 0.849
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.