STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDGFL3HDGF like 3. (203 aa)    
Predicted Functional Partners:
CDK12
Cyclin dependent kinase 12.
    
 
 0.667
H0VFQ7_CAVPO
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.667
HMCN2
Hemicentin 2.
    
 
 0.649
CCNQ
Cyclin Q; Belongs to the cyclin family.
   
 
 0.597
CCNK
Cyclin K; Belongs to the cyclin family.
   
 
 0.597
CCNT1
Cyclin T1; Belongs to the cyclin family.
   
 
 0.597
CCNT2
Cyclin T2; Belongs to the cyclin family.
   
 
 0.597
MAOB
Amine oxidase [flavin-containing] B; Catalyzes the oxidative deamination of biogenic and xenobiotic amines and has important functions in the metabolism of neuroactive and vasoactive amines in the central nervous system and peripheral tissues. MAOB preferentially degrades benzylamine and phenylethylamine (By similarity).
    
   0.538
MAOA
Amine oxidase.
    
   0.538
KDM1B
Lysine demethylase 1B.
    
   0.538
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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