STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKMY2Ankyrin repeat and MYND domain containing 2. (397 aa)    
Predicted Functional Partners:
AGO3
Argonaute RISC catalytic component 3; Belongs to the argonaute family.
    
 
 0.693
IFT57
Intraflagellar transport 57.
    
 0.614
COG5
Component of oligomeric golgi complex 5.
     
 0.601
SNX13
Sorting nexin 13.
    
 
 0.586
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.576
Ubxn7
UBX domain-containing protein 7.
    
 0.554
TSPAN13
Tetraspanin 13; Belongs to the tetraspanin (TM4SF) family.
      
 0.552
WDR90
WD repeat domain 90.
    
 0.550
MARS1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.544
IFT81
Intraflagellar transport 81.
    
 0.541
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.