STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM53Transmembrane protein 53. (278 aa)    
Predicted Functional Partners:
ASPHD2
Aspartate beta-hydroxylase domain containing 2.
      
 0.562
ACBD6
Acyl-CoA binding domain containing 6.
      
 0.561
B3GLCT
Beta 3-glucosyltransferase.
      
 0.560
TMEM223
Transmembrane protein 223.
      
 0.557
TMEM147
Transmembrane protein 147.
      
 0.549
ERI3
ERI1 exoribonuclease family member 3.
      
 0.535
RNF220
Ring finger protein 220.
      
 0.532
NME7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
      
 0.515
DMAP1
DNA methyltransferase 1 associated protein 1.
      
 0.497
Kifap3
Uncharacterized protein.
      
 0.493
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.