STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNE4Spectrin repeat containing nuclear envelope family member 4. (390 aa)    
Predicted Functional Partners:
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.959
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.953
SUN3
Sad1 and UNC84 domain containing 3.
    
 0.774
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
     
 0.701
CCDC155
Coiled-coil domain containing 155.
     
 0.689
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
     
 0.672
SUN5
Sad1 and UNC84 domain containing 5.
    
 
 0.636
KIF5B
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.631
SPAG4
Sperm associated antigen 4.
    
 
 0.614
KLC3
Kinesin light chain 3.
    
 
 0.487
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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