STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR54WD repeat domain 54. (334 aa)    
Predicted Functional Partners:
OSCP1
Organic solute carrier partner 1.
    
   0.658
CD99L2
CD99 molecule like 2.
      
 0.551
ITPRIPL1
ITPRIP like 1.
      
 0.548
FAM189A1
Family with sequence similarity 189 member A1.
    
 0.438
FAM189A2
Family with sequence similarity 189 member A2.
    
 0.438
RAB8B
RAB8B, member RAS oncogene family.
    
 0.438
RASEF
RAS and EF-hand domain containing.
    
 0.438
CRACR2B
Calcium release activated channel regulator 2B.
    
 0.438
RAB37
RAB37, member RAS oncogene family.
    
 0.438
GAREM1
GRB2 associated regulator of MAPK1 subtype 1.
    
 0.438
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.