STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC3Armadillo repeat containing 3. (869 aa)    
Predicted Functional Partners:
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.840
EFCAB1
EF-hand calcium binding domain 1.
   
 
 0.824
WDR90
WD repeat domain 90.
    
   0.808
ENSCPOP00000030387
Uncharacterized protein.
   
 
 0.764
TEKT3
Tektin 3.
   
 
 0.742
IQUB
IQ motif and ubiquitin domain containing.
   
 
 0.742
Cfap126
Uncharacterized protein.
   
 
 0.738
TEKT2
Tektin 2.
   
 
 0.728
C1orf194
Chromosome 1 open reading frame 194.
   
   0.718
TTC25
Tetratricopeptide repeat domain 25.
   
 
 0.700
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.