STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mical3Calponin-homology (CH) domain-containing protein. (685 aa)    
Predicted Functional Partners:
RAB8A
RAB8A, member RAS oncogene family.
   
 
 0.785
Rab13
Uncharacterized protein.
   
 
 0.714
RAB8B
RAB8B, member RAS oncogene family.
   
 
 0.662
RAB10
RAB10, member RAS oncogene family.
   
 
 0.628
RAB15
RAB15, member RAS oncogene family.
   
 
 0.569
STK3
Serine/threonine kinase 3.
    
 0.566
STK4
Serine/threonine kinase 4.
    
 0.566
GAREM1
GRB2 associated regulator of MAPK1 subtype 1.
   
 
 0.563
GAREM2
GRB2 associated regulator of MAPK1 subtype 2.
   
 
 0.563
KIF23
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.562
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.