NAALADL2 protein (Cavia porcellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NAALADL2

N-acetylated alpha-linked acidic dipeptidase like 2. (793 aa)

Predicted Functional Partners:

GAK

0.973

EPOR

0.775

FTMT

0.682

ENSCPOP00000029679

0.632

DOCK4

0.596

SORL1

0.589

DNAJC6

0.573

KATNAL2

0.557

TAFA2

0.554

TMEM117

0.553

Your Current Organism:

Cavia porcellus

NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNAJC6	DOCK4	ENSCPOP00000007840	ENSCPOP00000011187	DnaJ heat shock protein family (Hsp40) member C6.	Dedicator of cytokinesis 4; Belongs to the DOCK family.	0.485
DNAJC6	FTMT	ENSCPOP00000007840	ENSCPOP00000015131	DnaJ heat shock protein family (Hsp40) member C6.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	0.439
DNAJC6	GAK	ENSCPOP00000007840	ENSCPOP00000025229	DnaJ heat shock protein family (Hsp40) member C6.	Cyclin G associated kinase.	0.991
DNAJC6	NAALADL2	ENSCPOP00000007840	ENSCPOP00000012075	DnaJ heat shock protein family (Hsp40) member C6.	N-acetylated alpha-linked acidic dipeptidase like 2.	0.573
DNAJC6	SORL1	ENSCPOP00000007840	ENSCPOP00000013835	DnaJ heat shock protein family (Hsp40) member C6.	Sortilin related receptor 1.	0.980
DOCK4	DNAJC6	ENSCPOP00000011187	ENSCPOP00000007840	Dedicator of cytokinesis 4; Belongs to the DOCK family.	DnaJ heat shock protein family (Hsp40) member C6.	0.485
DOCK4	GAK	ENSCPOP00000011187	ENSCPOP00000025229	Dedicator of cytokinesis 4; Belongs to the DOCK family.	Cyclin G associated kinase.	0.669
DOCK4	NAALADL2	ENSCPOP00000011187	ENSCPOP00000012075	Dedicator of cytokinesis 4; Belongs to the DOCK family.	N-acetylated alpha-linked acidic dipeptidase like 2.	0.596
ENSCPOP00000029679	NAALADL2	ENSCPOP00000029679	ENSCPOP00000012075	N-acetyltransferase domain-containing protein.	N-acetylated alpha-linked acidic dipeptidase like 2.	0.632
EPOR	NAALADL2	ENSCPOP00000004407	ENSCPOP00000012075	Erythropoietin receptor.	N-acetylated alpha-linked acidic dipeptidase like 2.	0.775
FTMT	DNAJC6	ENSCPOP00000015131	ENSCPOP00000007840	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	DnaJ heat shock protein family (Hsp40) member C6.	0.439
FTMT	GAK	ENSCPOP00000015131	ENSCPOP00000025229	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	Cyclin G associated kinase.	0.611
FTMT	NAALADL2	ENSCPOP00000015131	ENSCPOP00000012075	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	N-acetylated alpha-linked acidic dipeptidase like 2.	0.682
GAK	DNAJC6	ENSCPOP00000025229	ENSCPOP00000007840	Cyclin G associated kinase.	DnaJ heat shock protein family (Hsp40) member C6.	0.991
GAK	DOCK4	ENSCPOP00000025229	ENSCPOP00000011187	Cyclin G associated kinase.	Dedicator of cytokinesis 4; Belongs to the DOCK family.	0.669
GAK	FTMT	ENSCPOP00000025229	ENSCPOP00000015131	Cyclin G associated kinase.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	0.611
GAK	NAALADL2	ENSCPOP00000025229	ENSCPOP00000012075	Cyclin G associated kinase.	N-acetylated alpha-linked acidic dipeptidase like 2.	0.973
GAK	SORL1	ENSCPOP00000025229	ENSCPOP00000013835	Cyclin G associated kinase.	Sortilin related receptor 1.	0.979
KATNAL2	NAALADL2	ENSCPOP00000007328	ENSCPOP00000012075	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	N-acetylated alpha-linked acidic dipeptidase like 2.	0.557
NAALADL2	DNAJC6	ENSCPOP00000012075	ENSCPOP00000007840	N-acetylated alpha-linked acidic dipeptidase like 2.	DnaJ heat shock protein family (Hsp40) member C6.	0.573