STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLANAMelan-A. (118 aa)    
Predicted Functional Partners:
HLA-DRA
Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.
    
   0.881
DCT
Dopachrome tautomerase.
   
  
 0.854
LOC100713671
Ig-like domain-containing protein; Belongs to the MHC class II family.
    
   0.774
GPR143
G protein-coupled receptor 143.
   
 
 0.718
HLA-DOA
Major histocompatibility complex, class II, DO alpha; Belongs to the MHC class II family.
    
   0.686
SLC45A2
Solute carrier family 45 member 2.
   
  
 0.671
TYR
Tyrosinase.
   
  
 0.639
TYRP1
Tyrosinase related protein 1.
   
  
 0.541
SLC24A5
Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.514
RAB38
RAB38, member RAS oncogene family.
   
  
 0.489
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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