STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEPDC1DEP domain containing 1. (527 aa)    
Predicted Functional Partners:
ANLN
Anillin actin binding protein.
   
 
 0.849
HMMR
Hyaluronan mediated motility receptor.
   
 
 0.754
LRAT
Lecithin retinol acyltransferase.
     
 0.750
TPX2
TPX2 microtubule nucleation factor.
   
  
 0.741
NUF2
NUF2 component of NDC80 kinetochore complex.
   
  
 0.733
KIF20A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.732
CCNA2
Cyclin A2; Belongs to the cyclin family.
   
  
 0.730
PBK
PDZ binding kinase.
   
 
 0.730
KIF11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.726
DLGAP5
DLG associated protein 5.
   
  
 0.725
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.