STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcn6Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (202 aa)    
Predicted Functional Partners:
CDC73
Cell division cycle 73.
    
 0.667
Paf1
Uncharacterized protein.
    
  0.647
Lcn12
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
      
 0.647
LCN8
Lipocalin 8; Belongs to the calycin superfamily. Lipocalin family.
 
 
  
 0.646
LCN10
Lipocalin 10; Belongs to the calycin superfamily. Lipocalin family.
 
  
0.639
C8B
Complement C8 beta chain.
   
 0.625
C8G
Complement C8 gamma chain; Belongs to the calycin superfamily. Lipocalin family.
      
 0.623
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.621
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.621
C7
Complement C7.
   
  0.557
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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