STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABGAP1LRAB GTPase activating protein 1 like. (1061 aa)    
Predicted Functional Partners:
Rabgef1
Uncharacterized protein.
   
  0.975
RAB6A
RAB6A, member RAS oncogene family.
    
 0.680
RAB6B
RAB6B, member RAS oncogene family.
    
 0.680
RAB34
RAB34, member RAS oncogene family.
    
 0.597
RAB36
RAB36, member RAS oncogene family.
    
 0.591
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
  0.549
AMPH
Amphiphysin.
    
 
 0.546
H0VY49_CAVPO
BAR domain-containing protein.
    
 
 0.546
BIN1
Bridging integrator 1.
    
 
 0.546
RAB22A
RAB22A, member RAS oncogene family.
    
 0.544
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.