STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC39Coiled-coil domain containing 39. (678 aa)    
Predicted Functional Partners:
CCDC40
Coiled-coil domain containing 40.
    
 
 0.878
IFT122
Intraflagellar transport 122.
   
 
 0.857
ARMC4
Armadillo repeat containing 4.
   
 
 0.769
RSPH9
Radial spoke head 9 homolog.
    
 
 0.741
CCDC103
Coiled-coil domain containing 103.
      
 0.740
Dnaaf3
Uncharacterized protein.
      
 0.735
CCDC65
Coiled-coil domain containing 65.
   
 
 0.721
RSPH1
Radial spoke head component 1.
    
 
 0.720
DNALI1
Dynein axonemal light intermediate chain 1.
    
 
 0.701
ENSCPOP00000026600
Uncharacterized protein.
   
 
 0.660
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.