STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP39Rho GTPase activating protein 39. (1114 aa)    
Predicted Functional Partners:
RHOF
Ras homolog family member F, filopodia associated.
    
  0.691
CDC42
Cell division cycle 42.
    
 0.688
RHOG
Ras homolog family member G.
    
 0.678
CAPZB
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.673
WDR18
WD repeat domain 18.
   
 0.658
LMNA
Lamin A/C; Belongs to the intermediate filament family.
    
  0.656
Lmnb2
Uncharacterized protein; Belongs to the intermediate filament family.
    
  0.656
LMNB1
Lamin B1; Belongs to the intermediate filament family.
    
  0.656
TEX10
Testis expressed 10.
    
 0.648
ARHGAP1
Rho GTPase activating protein 1.
     
0.637
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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