STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H0VUN9_CAVPOUncharacterized protein. (373 aa)    
Predicted Functional Partners:
Cog8
Uncharacterized protein.
   
 0.978
COG3
Component of oligomeric golgi complex 3.
   
 0.976
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.975
COG2
Component of oligomeric golgi complex 2.
   
 0.975
COG5
Component of oligomeric golgi complex 5.
    
 0.974
COG7
Component of oligomeric golgi complex 7.
    
 0.972
COG4
Component of oligomeric golgi complex 4.
    
 0.916
SMIM7
Small integral membrane protein 7.
    
 0.893
STX16
Syntaxin 16; Belongs to the syntaxin family.
   
 
 0.750
VPS51
VPS51 subunit of GARP complex.
   
 
 0.748
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.