STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H0VUT2_CAVPOUncharacterized protein. (227 aa)    
Predicted Functional Partners:
KAT6A
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
      
 0.583
Ccnb3
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
      
 0.583
Rilpl1
RH2 domain-containing protein.
      
 0.581
DLGAP4
DLG associated protein 4.
      
 0.580
Galnt9
Ricin B-type lectin domain-containing protein.
      
 0.579
SHANK2
SH3 and multiple ankyrin repeat domains 2.
      
 0.553
H0VBL5_CAVPO
Uncharacterized protein.
      
 0.480
RILP
Rab interacting lysosomal protein.
      
 0.437
GALNT17
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.436
KAT6B
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
      
 0.436
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.