STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCP11L1T-complex 11 like 1. (503 aa)    
Predicted Functional Partners:
TTC5
Tetratricopeptide repeat domain 5.
    
   0.643
AXIN1
Axin 1.
      
 0.611
DEPDC7
DEP domain containing 7.
 
    
 0.582
FAM92B
Family with sequence similarity 92 member B.
   
    0.566
TECRL
Trans-2,3-enoyl-CoA reductase like.
     
 0.536
TECR
Trans-2,3-enoyl-CoA reductase.
     
 0.536
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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