STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYBPC2Myosin binding protein C, fast type. (1137 aa)    
Predicted Functional Partners:
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.813
WDR18
WD repeat domain 18.
   
 0.809
TEX10
Testis expressed 10.
   
 0.792
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
 0.779
MYL1
Myosin light chain 1.
   
 0.751
ACTN2
Actinin alpha 2.
   
 0.724
TCAP
Titin-cap.
   
 0.716
MYL2
Myosin light chain 2.
   
 0.710
NEB
Nebulin.
   
 0.700
BOP1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.679
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.