STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGALS4Galectin. (303 aa)    
Predicted Functional Partners:
TBP
TATA-box binding protein.
      
 0.565
HPD
4-hydroxyphenylpyruvate dioxygenase.
      
 0.526
GTF2B
General transcription factor IIB.
      
 0.517
REG4
Regenerating family member 4.
   
 
 0.515
C16orf74
Chromosome 16 open reading frame 74.
      
 0.476
ANXA10
Annexin A10.
      
 0.473
LOC100730653
Ig-like domain-containing protein.
    
 0.456
ENSCPOP00000023466
Ig-like domain-containing protein.
    
 0.456
AGR2
Anterior gradient 2, protein disulphide isomerase family member.
   
 
 0.450
PHGDH
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
      
 0.446
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.