STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RELARELA proto-oncogene, NF-kB subunit. (549 aa)    
Predicted Functional Partners:
NFKBIA
NFKB inhibitor alpha.
 
 
 0.999
NFKB1
Nuclear factor kappa B subunit 1.
   
0.999
NFKBIB
NFKB inhibitor beta.
   
 0.998
RELB
RELB proto-oncogene, NF-kB subunit.
  
0.998
REL
REL proto-oncogene, NF-kB subunit.
  
 
0.996
CREBBP
CREB binding protein.
    
 0.996
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.993
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.993
EP300
E1A binding protein p300.
    
 0.989
KPNA4
Importin subunit alpha; Functions in nuclear protein import.
    
 0.988
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.