STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM60Transmembrane protein 60. (133 aa)    
Predicted Functional Partners:
FAM229B
Family with sequence similarity 229 member B.
      
 0.681
TVP23B
Golgi apparatus membrane protein TVP23 homolog.
      
 0.586
DENR
Density-regulated protein; Belongs to the DENR family.
      
 0.576
B3GALT2
Hexosyltransferase.
      
 0.513
DRD1
Dopamine receptor D1; Belongs to the G-protein coupled receptor 1 family.
      
 0.478
PIK3R1
Phosphoinositide-3-kinase regulatory subunit 1.
     
 0.461
H0W027_CAVPO
Uncharacterized protein.
     
 0.461
LOC100734206
Uncharacterized protein.
     
 0.461
GPR37
G protein-coupled receptor 37.
      
 0.451
P3R3URF
PIK3R3 upstream reading frame.
     
 0.440
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.