STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPDYASpeedy/RINGO cell cycle regulator family member A. (295 aa)    
Predicted Functional Partners:
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.843
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
 0.813
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 
 0.813
CDK2
Cyclin dependent kinase 2; Belongs to the protein kinase superfamily.
    
 0.725
Cdk1
Protein kinase domain-containing protein.
    
 0.687
ENSCPOP00000029129
Protein kinase domain-containing protein.
    
 0.687
ENSCPOP00000030888
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.687
H0WBA3_CAVPO
Uncharacterized protein.
  
  
 
0.651
CDK4
Cyclin dependent kinase 4; Belongs to the protein kinase superfamily.
    
 0.596
CDK6
Cyclin dependent kinase 6; Belongs to the protein kinase superfamily.
    
 0.596
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.