STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNDC4Fibronectin type III domain containing 4. (229 aa)    
Predicted Functional Partners:
EIF2B4
Eukaryotic translation initiation factor 2B subunit delta; Belongs to the eIF-2B alpha/beta/delta subunits family.
      
 0.524
ZNF512
Zinc finger protein 512.
      
 0.514
CCDC61
Coiled-coil domain containing 61.
   
  
 0.502
Atraid
Uncharacterized protein.
      
 0.437
CRCP
DNA-directed RNA polymerase III subunit RPC9; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs (By similarity); Belongs to the eukaryotic RPC9 RNA polymerase subunit family.
      
 0.436
ASCC3
Activating signal cointegrator 1 complex subunit 3.
      
 0.433
SNX17
Sorting nexin 17.
      
 0.422
FNDC3A
Fibronectin type III domain containing 3A.
      
 0.410
Ccdc141
Ig-like domain-containing protein.
      
 0.408
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.