STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E2F6E2F transcription factor 6. (269 aa)    
Predicted Functional Partners:
TFDP1
Transcription factor.
  
 0.979
TFDP2
Transcription factor.
  
 0.979
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.967
RNF2
Ring finger protein 2.
    
 0.966
PCGF6
Polycomb group ring finger 6.
    
 0.966
MGA
MAX dimerization protein MGA.
    
 0.945
RYBP
RING1 and YY1 binding protein.
   
 0.943
RING1
Ring finger protein 1.
    
 0.932
MAX
MYC associated factor X.
    
 0.913
MBTD1
Mbt domain containing 1.
    
 0.899
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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