STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NacadNAC-A/B domain-containing protein. (1346 aa)    
Predicted Functional Partners:
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.980
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.976
RPL4
Ribosomal protein L4.
   
 
 0.974
RPL7A
Ribosomal protein L7a.
   
 
 0.968
RPL5
Ribosomal_L18_c domain-containing protein.
  
 
 0.965
BTF3
Transcription factor BTF3; Belongs to the NAC-beta family.
   
 
 0.956
RPL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
   0.956
H0W6W7_CAVPO
Transcription factor BTF3; Belongs to the NAC-beta family.
   
 
 0.956
BTF3L4
Transcription factor BTF3; Belongs to the NAC-beta family.
   
 
 0.956
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.954
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.