STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAP1L1Nucleosome assembly protein 1 like 1; Belongs to the nucleosome assembly protein (NAP) family. (385 aa)    
Predicted Functional Partners:
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 
 0.888
H2AZ2
Histone H2A; Belongs to the histone H2A family.
   
 
 0.884
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.884
NCL
Nucleolin.
   
 
 0.831
IPO9
Importin 9.
   
 
 0.750
SHISA4
Shisa family member 4.
   
 
 0.750
Rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.745
H0W774_CAVPO
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.745
H0W7V4_CAVPO
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.745
FNTA
Farnesyltransferase, CAAX box, alpha.
   
 
 0.716
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.