STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLIC1Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. (241 aa)    
Predicted Functional Partners:
EZR
Ezrin.
   
 0.823
TPRN
Taperin.
    
 0.807
GSR
Glutathione-disulfide reductase.
     
 0.675
PRDX6
Peroxiredoxin 6.
   
 0.668
GSS
Glutathione synthetase.
     
 0.630
GPX2
Glutathione peroxidase 2.
     
 0.620
PPP1R18
Protein phosphatase 1 regulatory subunit 18.
    
 0.608
MGST1
Microsomal glutathione S-transferase 1.
     
 0.594
VARS1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.592
RDX
Radixin.
   
  0.578
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.