STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXRA8Matrix remodeling associated 8. (410 aa)    
Predicted Functional Partners:
LDLRAD3
Low density lipoprotein receptor class A domain containing 3.
      
 0.703
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.614
VLDLR
Very low density lipoprotein receptor.
      
 0.584
C1QL2
Complement C1q like 2.
     
 0.580
Mxra7
Uncharacterized protein.
      
 0.542
LRP1B
LDL receptor related protein 1B.
      
 0.530
MEAK7
MTOR associated protein, eak-7 homolog.
      
 0.523
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
     
 0.517
B3GAT3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
      
 0.491
SAMD7
Sterile alpha motif domain containing 7.
     
 0.481
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.