STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H0WDZ5_CAVPOHomeobox domain-containing protein. (154 aa)    
Predicted Functional Partners:
PBX1
PBX homeobox 1.
    
 0.635
PBX2
PBX homeobox 2.
    
 0.635
PBX3
PBX homeobox 3.
    
 0.635
H0V6I7_CAVPO
Uncharacterized protein.
    
 
 0.590
DNM3
Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
      
 0.555
OPCML
Opioid binding protein/cell adhesion molecule like.
      
 0.539
LHX6
LIM homeobox 6.
    
 
 0.458
LHX8
LIM homeobox 8.
    
 
 0.454
ABHD10
Abhydrolase domain containing 10.
      
 0.435
CUX1
Cut like homeobox 1.
      
 0.434
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.