STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLQCollagen like tail subunit of asymmetric acetylcholinesterase. (465 aa)    
Predicted Functional Partners:
DOK7
Docking protein 7.
      
 0.797
HACL1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
 
      0.779
MUSK
Muscle associated receptor tyrosine kinase.
    
 0.723
RAPSN
Receptor associated protein of the synapse.
      
 0.721
ACHE
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 
 0.701
BCHE
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 
 0.683
TEP1
Telomerase associated protein 1.
    
 0.652
C1QC
Complement C1q C chain.
  
 
 
0.619
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.610
HSPG2
Heparan sulfate proteoglycan 2.
    
 
 0.555
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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