STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NID2Nidogen 2. (1327 aa)    
Predicted Functional Partners:
HSPG2
Heparan sulfate proteoglycan 2.
   
 0.944
LAMC1
Laminin subunit gamma 1.
   
 0.894
AGRN
Agrin.
   
 0.824
LAMC3
Laminin subunit gamma 3.
   
 0.819
LAMA4
Laminin subunit alpha 4.
   
 0.786
LAMA2
Laminin subunit alpha 2.
   
 0.758
LAMB1
Laminin subunit beta 1.
   
 0.751
CYB5R4
Cytochrome b5 reductase 4.
    
 0.700
LAMA5
Laminin subunit alpha 5.
   
 0.693
LAMA3
Laminin subunit alpha 3.
   
 0.683
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.