STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100723644C-type lectin domain-containing protein. (222 aa)    
Predicted Functional Partners:
LOC106026888
MHC_I-like_Ag-recog domain-containing protein.
    
 0.943
TYROBP
TYRO protein tyrosine kinase binding protein.
   
 0.831
CLEC12A
C-type lectin domain family 12 member A.
   
 
0.754
KLRD1
Killer cell lectin like receptor D1.
   
 
0.753
TNR
Tenascin R.
    
  0.583
TNN
Tenascin N.
    
  0.583
TNC
Tenascin C.
    
  0.583
CD8A
CD8 alpha.
   
  
 0.573
RAE1
Ribonucleic acid export 1.
    
 
 0.565
SYK
Tyrosine-protein kinase.
   
 0.565
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.