STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALMS1ALMS1 centrosome and basal body associated protein. (3698 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.845
PLK1
Serine/threonine-protein kinase PLK.
    
  0.736
RANBP2
RAN binding protein 2.
    
 0.727
HAUS8
HAUS augmin like complex subunit 8.
  
  
  0.675
CMYA5
Cardiomyopathy associated 5.
  
 
 
 0.669
RAB11A
Uncharacterized protein.
    
  0.656
RAB11B
RAB11B, member RAS oncogene family.
    
  0.656
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.655
KDM6A
Lysine demethylase 6A.
   
 0.653
SHROOM4
Shroom family member 4.
  
 
 0.649
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.