STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11orf1Chromosome 11 open reading frame 1. (120 aa)    
Predicted Functional Partners:
TEKT3
Tektin 3.
   
   0.717
EFHB
EF-hand domain family member B.
   
   0.717
C1orf158
Chromosome 1 open reading frame 158.
   
   0.717
TEKT1
Tektin 1.
   
   0.683
TEKT2
Tektin 2.
   
   0.682
CFAP77
Cilia and flagella associated protein 77.
   
   0.682
C5orf49
Chromosome 5 open reading frame 49.
   
   0.682
CFAP45
Cilia and flagella associated protein 45.
   
   0.678
MNS1
Meiosis specific nuclear structural 1.
   
   0.671
CFAP53
Cilia and flagella associated protein 53.
    
   0.670
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.