STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNNI2Troponin I2, fast skeletal type. (190 aa)    
Predicted Functional Partners:
TNNC2
Troponin C2, fast skeletal type.
   
 0.999
TNNT3
Troponin T3, fast skeletal type.
 
 
 0.996
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.995
TNNT1
Troponin T1, slow skeletal type.
 
 
 0.985
ATP2A1
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
   
 0.976
TNNT2
Uncharacterized protein.
 
 
 0.975
MYL1
Myosin light chain 1.
   
 0.970
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.955
SMIM20
Small integral membrane protein 20.
   
 0.930
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
 0.922
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.