STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEDDDeath effector domain containing. (318 aa)    
Predicted Functional Partners:
REXO4
REX4 homolog, 3'-5' exonuclease.
      
 0.571
ISG20L2
Interferon stimulated exonuclease gene 20 like 2.
      
 0.571
OAZ3
Ornithine decarboxylase antizyme 3.
      
 0.535
TRIML1
Tripartite motif family like 1.
      
 0.535
ERI1
Exoribonuclease 1.
      
 0.530
ZSWIM2
Zinc finger SWIM-type containing 2.
      
 0.509
CCT6B
Chaperonin containing TCP1 subunit 6B.
      
 0.509
CNOT4
CCR4-NOT transcription complex subunit 4.
      
 0.504
TRIM17
Tripartite motif containing 17.
      
 0.470
PDE6H
Phosphodiesterase 6H.
      
 0.449
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.