Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MED22 | SURF1 | ENSCPOP00000001203 | ENSCPOP00000001205 | Mediator complex subunit 22. | SURF1-like protein; Component of the MITRAC (mitochondrial translation regulation assembly intermediate of cytochrome c oxidase complex) complex, that regulates cytochrome c oxidase assembly. Belongs to the SURF1 family. | 0.530 |
MED22 | SURF2 | ENSCPOP00000001203 | ENSCPOP00000024146 | Mediator complex subunit 22. | Surfeit 2. | 0.534 |
MED22 | SURF4 | ENSCPOP00000001203 | ENSCPOP00000029606 | Mediator complex subunit 22. | Surfeit 4. | 0.517 |
MED22 | SURF6 | ENSCPOP00000001203 | ENSCPOP00000023544 | Mediator complex subunit 22. | Surfeit 6. | 0.667 |
PACRG | SURF2 | ENSCPOP00000012072 | ENSCPOP00000024146 | Parkin coregulated. | Surfeit 2. | 0.430 |
PREPL | SURF2 | ENSCPOP00000008537 | ENSCPOP00000024146 | Prolyl endopeptidase like. | Surfeit 2. | 0.552 |
SURF1 | MED22 | ENSCPOP00000001205 | ENSCPOP00000001203 | SURF1-like protein; Component of the MITRAC (mitochondrial translation regulation assembly intermediate of cytochrome c oxidase complex) complex, that regulates cytochrome c oxidase assembly. Belongs to the SURF1 family. | Mediator complex subunit 22. | 0.530 |
SURF1 | SURF2 | ENSCPOP00000001205 | ENSCPOP00000024146 | SURF1-like protein; Component of the MITRAC (mitochondrial translation regulation assembly intermediate of cytochrome c oxidase complex) complex, that regulates cytochrome c oxidase assembly. Belongs to the SURF1 family. | Surfeit 2. | 0.574 |
SURF1 | SURF4 | ENSCPOP00000001205 | ENSCPOP00000029606 | SURF1-like protein; Component of the MITRAC (mitochondrial translation regulation assembly intermediate of cytochrome c oxidase complex) complex, that regulates cytochrome c oxidase assembly. Belongs to the SURF1 family. | Surfeit 4. | 0.687 |
SURF1 | SURF6 | ENSCPOP00000001205 | ENSCPOP00000023544 | SURF1-like protein; Component of the MITRAC (mitochondrial translation regulation assembly intermediate of cytochrome c oxidase complex) complex, that regulates cytochrome c oxidase assembly. Belongs to the SURF1 family. | Surfeit 6. | 0.536 |
SURF2 | MED22 | ENSCPOP00000024146 | ENSCPOP00000001203 | Surfeit 2. | Mediator complex subunit 22. | 0.534 |
SURF2 | PACRG | ENSCPOP00000024146 | ENSCPOP00000012072 | Surfeit 2. | Parkin coregulated. | 0.430 |
SURF2 | PREPL | ENSCPOP00000024146 | ENSCPOP00000008537 | Surfeit 2. | Prolyl endopeptidase like. | 0.552 |
SURF2 | SURF1 | ENSCPOP00000024146 | ENSCPOP00000001205 | Surfeit 2. | SURF1-like protein; Component of the MITRAC (mitochondrial translation regulation assembly intermediate of cytochrome c oxidase complex) complex, that regulates cytochrome c oxidase assembly. Belongs to the SURF1 family. | 0.574 |
SURF2 | SURF4 | ENSCPOP00000024146 | ENSCPOP00000029606 | Surfeit 2. | Surfeit 4. | 0.586 |
SURF2 | SURF6 | ENSCPOP00000024146 | ENSCPOP00000023544 | Surfeit 2. | Surfeit 6. | 0.554 |
SURF4 | MED22 | ENSCPOP00000029606 | ENSCPOP00000001203 | Surfeit 4. | Mediator complex subunit 22. | 0.517 |
SURF4 | SURF1 | ENSCPOP00000029606 | ENSCPOP00000001205 | Surfeit 4. | SURF1-like protein; Component of the MITRAC (mitochondrial translation regulation assembly intermediate of cytochrome c oxidase complex) complex, that regulates cytochrome c oxidase assembly. Belongs to the SURF1 family. | 0.687 |
SURF4 | SURF2 | ENSCPOP00000029606 | ENSCPOP00000024146 | Surfeit 4. | Surfeit 2. | 0.586 |
SURF4 | SURF6 | ENSCPOP00000029606 | ENSCPOP00000023544 | Surfeit 4. | Surfeit 6. | 0.554 |
page 1 of 2