STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERLIN2ER lipid raft associated 2. (339 aa)    
Predicted Functional Partners:
ERLIN1
ER lipid raft associated 1.
  
 
0.982
AMFR
Autocrine motility factor receptor.
    
 
 0.820
TMUB1
Transmembrane and ubiquitin like domain containing 1.
    
 
 0.797
RNF185
Ring finger protein 185.
   
 0.792
RNF5
Ring finger protein 5.
   
 0.790
RNF170
Ring finger protein 170.
    
 
 0.783
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 
 0.775
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
     
 0.728
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.725
PHB
Prohibitin.
    
 
 0.724
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.