STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100726574LAM_G_DOMAIN domain-containing protein. (459 aa)    
Predicted Functional Partners:
ENSCPOP00000027747
LAM_G_DOMAIN domain-containing protein.
 
      0.900
H0VSR6_CAVPO
Uncharacterized protein.
 
      0.899
H0W504_CAVPO
Uncharacterized protein.
 
      0.899
NLGN1
Neuroligin 1.
   
 0.860
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.850
NLGN3
Neuroligin 3.
   
 0.814
NLGN2
Neuroligin 2.
    
 0.812
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
    
 0.746
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.689
NXPH1
Neurexophilin; May be signaling molecules that resemble neuropeptides.
   
 
 0.679
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.