STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPOP00000024660Uncharacterized protein. (266 aa)    
Predicted Functional Partners:
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.719
AAR2
AAR2 splicing factor.
    
 
 0.716
Tssc4
Uncharacterized protein.
    
 
 0.711
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.687
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 
 0.677
CD2BP2
CD2 cytoplasmic tail binding protein 2.
    
 
 0.675
GPATCH1
G-patch domain containing 1.
    
   0.656
DHX35
DEAH-box helicase 35.
    
   0.656
ECD
Ecdysoneless cell cycle regulator.
    
   0.652
DDX23
DEAD-box helicase 23.
    
   0.641
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.