STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX4T-box transcription factor 4. (452 aa)    
Predicted Functional Partners:
NKX2-5
NK2 homeobox 5.
   
 
 0.876
WWTR1
WW domain containing transcription regulator 1.
    
 0.697
YAP1
Yes associated protein 1.
    
 0.697
PITX1
Homeobox protein.
   
  
 0.667
HOXC10
Homeobox C10.
    
 
 0.628
TBL1XR1
Transducin beta like 1 X-linked receptor 1.
    
 
 0.601
PROM1
Prominin 1.
      
 0.593
SOX30
SRY-box transcription factor 30.
    
 
 0.587
FGFBP1
Fibroblast growth factor binding protein 1.
      
 0.571
BMP2
Bone morphogenetic protein 2.
     
 0.566
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.