STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFSF8Tumor necrosis factor ligand 3A; Belongs to the tumor necrosis factor family. (234 aa)    
Predicted Functional Partners:
H0VE24_CAVPO
TNFR-Cys domain-containing protein.
    
 0.935
TNFRSF1B
TNF receptor superfamily member 1B.
   
 
 0.790
CD27
CD27 molecule.
   
  
 0.569
TNFRSF4
TNF receptor superfamily member 4.
      
 0.556
TNFSF15
Tumor necrosis factor ligand 1B.
      
 0.553
RGS12
Regulator of G protein signaling 12.
      
 0.542
PROCR
Protein C receptor.
  
     0.497
IBSP
Integrin binding sialoprotein.
  
     0.466
TNFSF4
Tumor necrosis factor ligand 2B; Belongs to the tumor necrosis factor family.
   
  
 0.455
CD53
Tetraspanin.
   
  
 0.454
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.