STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX7SRY-box transcription factor 7. (384 aa)    
Predicted Functional Partners:
Pou5f1
POU domain protein.
    
 0.769
CTNNB1
Catenin beta 1.
    
 0.753
LEF1
Lymphoid enhancer binding factor 1.
    
0.745
TCF7
Transcription factor 7.
    
0.730
JUP
Junction plakoglobin.
    
 0.639
TCF7L1
Transcription factor 7 like 1.
    
0.626
TCF7L2
Transcription factor 7 like 2.
    
0.626
SOX17
SRY-box transcription factor 17.
  
 
0.622
H0VDD3_CAVPO
Homeobox domain-containing protein.
    
 0.621
Gata4
Uncharacterized protein.
    
 0.608
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.