STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL29Kelch like family member 29. (942 aa)    
Predicted Functional Partners:
BBS9
Bardet-Biedl syndrome 9.
    
 0.686
TTC8
Tetratricopeptide repeat domain 8.
    
 0.663
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.653
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.647
HDHD3
Haloacid dehalogenase like hydrolase domain containing 3.
    
 
 0.642
Ubxn7
UBX domain-containing protein 7.
    
  0.614
NBR1
NBR1 autophagy cargo receptor.
    
 0.611
ATAD2B
ATPase family AAA domain containing 2B.
   
 
 0.571
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.566
CACUL1
CDK2 associated cullin domain 1.
    
 0.566
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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