STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100723931Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (462 aa)    
Predicted Functional Partners:
CYB5R4
Cytochrome b5 reductase 4.
    
 0.700
WDR43
WD repeat domain 43.
   
 0.659
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.655
UTP20
UTP20 small subunit processome component.
   
 0.654
UTP4
UTP4 small subunit processome component.
    
 0.637
WDR75
WD repeat domain 75.
   
  0.631
UTP15
UTP15 small subunit processome component.
   
 0.629
NOP58
NOP58 ribonucleoprotein.
   
  0.623
GUSB
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
   
 0.621
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
  0.603
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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