STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100724861Uncharacterized protein. (480 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 member 1.
  
 0.928
SLC3A2
Solute carrier family 3 member 2.
  
 0.857
KIAA0513
KIAA0513.
   
 0.743
ALKBH2
AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
   
 0.743
ALKBH3
AlkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
   
 0.735
ENSCPOP00000021708
Uncharacterized protein.
  
  
 
0.659
LOC100725369
Uncharacterized protein.
  
  
 
0.658
LOC100725370
Uncharacterized protein.
  
  
 
0.658
LOC100724525
Alpha-amylase.
   
 0.598
NUDT12
Nudix hydrolase 12.
   
  0.575
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.